Correlated proton dynamics in hydrogen bonding networks: the benchmark case of 3-hydroxyglutaric acid
文献信息
Bruno Martínez-Haya, Juan Ramón Avilés-Moreno, Francisco Gámez, Jonathan Martens, Jos Oomens, Giel Berden
Proton and hydrogen-bonded networks sustain a broad range of structural and charge transfer processes in supramolecular materials. The modelling of proton dynamics is however challenging and demands insights from prototypical benchmark systems. The intramolecular H-bonding networks induced by either protonation or deprotonation of 3-hydroxyglutaric acid provide intriguing case studies of correlated proton dynamics. The vibrational signatures associated with the fluxional proton bonding and its coupling with the hydroxyglutaric backbone are investigated here with infrared action ion spectroscopy experiments and Born–Oppenheimer molecular dynamics (BOMD) computations. Despite the formally similar symmetry of protonated and deprotonated hydroxyglutaric acid, the relative proton affinities of the oxygen centers of the carboxylic and carboxylate groups with respect to that of the central hydroxyl group lead to distinct proton dynamics. In the protonated acid, a tautomeric arrangement of the type HOCO·[HOH]+·OCOH is preferred with the proton binding tighter to the central hydroxyl moiety and the electronic density being shared between the two nearly symmetric H-bonds with the carboxylic end groups. In the deprotonated acid, the asymmetric [OCO]−·HO·HOCO configuration is more stable, with a stronger H-bonding on the bare carboxylate end. Both systems display active backbone dynamics and concerted Grothuss-like proton motions, leading to diffuse band structures in their vibrational spectra. These features are accurately reproduced by the BOMD computations.
相关文献
Multi-column ultra-high performance liquid chromatography screening with chaotropic agents and computer-assisted separation modeling enables process development of new drug substances
Imad A. Haidar Ahmad, Wenyong Chen, Holst M. Halsey, Artis Klapars, John Limanto, Gregory F. Pirrone, Timothy Nowak, Raffeal Bennett, Robert Hartman, Alexey A. Makarov, Ian Mangion, Erik L. Regalado
DOI: 10.1039/C8AN02499E
Spectroelectrochemical study of the AMP-Ag+ and ATP-Ag+ complexes using silver mesh electrodes
Tano Patrice Fato, Li-Jun Zhao, Kouadio Fodjo Essy, Da-Wei Li, Yi-Tao Long
DOI: 10.1039/C8AN00097B
Hydrothermal synthesis of N-doped carbon dots from an ethanolamine–ionic liquid gel to construct label-free multifunctional fluorescent probes for Hg2+, Cu2+ and S2O32−
Baogang Wang, Hui Tan, Tailiang Zhang, Wenmeng Duan, Yuanqiang Zhu
DOI: 10.1039/C9AN00116F
Colorimetric sensor for cimetidine detection in human urine based on d-xylose protected gold nanoparticles
Fan Hu, PinPing Wu, RuYa Wang, Wei Liu
DOI: 10.1039/C8AN00499D
An implanted pH sensor read using radiography
Md. Arifuzzaman, Paul W. Millhouse, Yash Raval, Thomas B. Pace, Shayesteh Beladi Behbahani, John D. DesJardins, Tzuen-Rong J. Tzeng
DOI: 10.1039/C8AN02337A
An automatic integrated microfluidic system for allergy microarray chips‡
Wen-Yen Huang, Shang-Ta Chou, Chia-Hui Chen, Shan-Ying Chou, Jia-Han Wu, Yu-Chen Chen
DOI: 10.1039/C8AN00247A
Label-free density-based detection of adipocytes of bone marrow origin using magnetic levitation
Oyku Sarigil, Muge Anil-Inevi, Esra Yilmaz, Gulistan Mese, H. Cumhur Tekin, Engin Ozcivici
DOI: 10.1039/C8AN02503G
A facile graphene oxide-based fluorescent nanosensor for the in situ “turn-on” detection of telomerase activity
Li Zhang, Jie Peng, Ming-Fang Hong, Jia-Qing Chen, Ru-Ping Liang
DOI: 10.1039/C8AN00402A
A near-infrared fluorescent probe for evaluating endogenous hydrogen peroxide during ischemia/reperfusion injury
Huiyan You, Liangwei Zhang, Yunqing Wang
DOI: 10.1039/C9AN00243J
Investigation of chemical composition of meat using spatially off-set Raman spectroscopy
Saeideh Ostovar pour, Stephanie M. Fowler, David L. Hopkins, Peter J. Torley, Harsharn Gill, Ewan W. Blanch
DOI: 10.1039/C8AN01958D
您可能还喜欢
什么是2,6-二溴-4,8-双[(2-乙基己基)氧基]苯并[1,2-b:4,5-b']二噻吩(CAS号:1226782-13-3)?
2,6-二溴-4,8-双[(2-乙基己基)氧基]苯并[1,2-b:4,5-b']二噻吩是一种有机化合物,分子式为C23H32Br2O2S2。该化合物具有芳香性和...
木聚硫钠(CAS号:37319-17-8)的物理化学性质是什么?
木聚硫钠通常为无色或白色结晶性粉末,具有吸湿性。其分子量约为121.11 g/mol。木聚硫钠易溶于水,不溶于醇类和其他非极性溶剂。在酸性或碱性溶液中,木聚硫钠...
2-甲氧基-4-(三氟甲基)苄溴, JRD(CAS号:886500-59-0)适用哪些法规指南?
该化合物在合成、储存和运输过程中需遵循《全球化学品统一分类和标签制度》(GHS)的健康、环境和物理危险分类。在欧洲还需符合《化学品注册、评估、授权和限制》(RE...
1,4-Diazoniabicyclo[2.2.2]octane-1,4-disulfinate(CAS号:119752-83-9)的主要用途是什么?
1,4-二氮杂双环[2.2.2]辛烷-1,4-二硫酸二酯主要用于有机合成中的保护基团,特别是在保护胺基和硫醇基方面具有广泛应用。此外,它还用于一些特殊化学反应的...
如何处理含有4-(Bromomethyl)-2-fluorobenzenesulphonamide(CAS号:1645275-47-3)的废料?
含有4-(Bromomethyl)-2-fluorobenzenesulphonamide的废液应首先进行中和处理,以降低pH值,避免对环境造成腐蚀性影响。随后...
Loureiriol(CAS号:479195-44-3)的物理化学性质是什么?
Loureiriol是一种天然化合物,其分子式为C15H22O4。Loureiriol为无色结晶性粉末,具有较高的熔点和良好的热稳定性。其相对分子质量为262....
在合成中是否有3-氨基苯甲酰苯胺(CAS号:14315-16-3)的替代品?
在合成过程中,可以考虑使用类似结构的化合物作为3-氨基苯甲酰苯胺的替代品,例如N-苯基-3-氰基苯胺或N-苯基-3-硝基苯胺等,这些化合物具有相似的化学性质,可...
4-异氰酰苯基硼酸频哪醇酯(CAS号:380430-64-8)的市场或研究趋势如何?
4-异氰酰苯基硼酸频哪醇酯主要应用于有机合成、药物化学和材料科学领域。随着绿色化学的发展,该化合物因其高效的官能团转化能力和环境友好性而受到越来越多的关注。近年...
如何储存3β-乙酰氧基-7,25-甘遂二烯-24(R)-醇(CAS号:1352001-09-2)?
3β-乙酰氧基-7,25-甘遂二烯-24(R)-醇应储存在阴凉、干燥、通风良好的地方,避免直接光照。储存容器应密封,防止空气中的水分和氧气影响化合物的稳定性。建...
如何储存4-氟-2-甲基-1H-吲哚(CAS号:1260383-51-4)?
应将4-氟-2-甲基-1H-吲哚存放在阴凉、干燥、通风良好的地方,避免直接暴露在光照下。容器应密封,避免与空气中的水蒸气接触。建议在避光、温度不超过25℃的环境...
来源期刊
Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.














